cellclass sbatch

Submit a CellClass training job to SLURM.

cellclass sbatch [OPTIONS] [TRAINING_ARGS]...

Place arguments forwarded to training after --args.

Full --help output

Usage: cellclass sbatch [OPTIONS] [TRAINING_ARGS]...

  Submit a CellClass training job to SLURM.

  Place arguments forwarded to training after ``--args``.

Options:
  --class TEXT          [default: gpu]
  --results-dir TEXT    [default: /mnt/lustre/users/gdsc/]
  -u, --username TEXT   [default: runner]
  --hours INTEGER       [default: 12]
  -m, --memory INTEGER  [default: 32]
  --no-gpu
  --no-exec
  --no-submit
  --help                Show this message and exit.

Arguments

TRAINING_ARGS: TEXT

Optional.

Options

--class: TEXT = gpu

 

--results-dir: TEXT = /mnt/lustre/users/gdsc/

 

-u, --username: TEXT = runner

 

--hours: INTEGER = 12

 

-m, --memory: INTEGER = 32

 

--no-gpu

 

--no-exec

 

--no-submit