welldata_api.parse_plate_data()

Function that combines the different parser classes that are responsible to process userinput

Usage

Source

welldata_api.parse_plate_data(
    omero_data,
    plate_id,
    well_pos,
    image_input,
    conn,
    time="All",
    options=None
)

and plate data and collect data to populate the plate related fields in the omero_data data class.

Parameters

omero_data: OmeroData

OmeroData class object that receives the parsed data

plate_id: int

Omero Screen Plate ID number provided by user via welldata_widget

well_pos: str

List of wells provided by welldata_widget (e.g ‘A1, A2’)

image_input: str

String Describing the combinations of images to be supplied for each well The images options are ‘All’; 0-3; 1, 3, 4.

conn: BlitzGateway

BlitzGateway connection