# CLI reference


`omero-screen ID...` runs the pipeline on one or more plates. Two options keep argparse spellings that Click does not accept natively: `--track` takes an optional model name (a bare flag means `general_2d`), and `--inference` accepts several values after one flag.


[omero-screen](../../reference/cli/omero_screen.md)  
Run the OMERO-Screen analysis pipeline on one or more plates.